An Alien God

I wonder if anyone ever remarked on the seemingly excellent evidence thus provided for Hinduism over Christianity. Probably not.

Well, David Hume did. In the Dialogues Concerning Natural Religion. Although not with a totally straight face.

The best book-long treatise about your points is probably Dawkins' The Selfish Gene. But you probably know that.

Maybe predators are wary of rattles and don't step on the snake. Or maybe the rattle diverts attention from the snake's head.

The point of a rattle, as I understand it, is that it's metabolically expensive, and time consuming, to produce poison. A snake that can chase off a dozen threats a day by wagging its tail is much better off probability-of-producing-offspring-wise than one that can only bite and poison three threats before being left defenseless for a few days.

It does leave me wondering what benefits the intermediate mutations provide though, since going from a normal snake tail to a rattle seems like it would take more than one step.

I'm not convinced that evolution is closer to "god" than to pure entropy. Really, the Tegmark big universe seems much closer to both "god" and pure entropy than evolution does, and may be a necessary creator for life as well, though it's still possible the evolution can do the whole job itself. Evolution has this whole "embedded in time" schtick going on that definitely makes it more like "gods" than like "god", as you observed.

Our metabolism IS capable of detecting which nutrients we're low on and setting up cravings for foods we've learned are rich in those substances. Fat used to be such to be such a rare and valuable nutrient that there was no reason to ever restrict our intake of it - the more we could get, the better to survive the next famine.

I like having a Creator I can outwit.

Eliezer,

You say: "if you can invent an equally persuasive explanation for any outcome, you have zero knowledge."

You'll want to read Quine on this. Quine thought that for nearly any sufficiently large data set there were an infinite number of theories that could accurately explain it. Now, granted, some theories are better than others, but many theories are harder to compare with others. Here are some examples:

Suppose you have three theoretical values: simplicity, coherence, and accommodation of the data. Different parts of a given scientific community may have distinct value rankings; they may consider some values more important than others. As a result, they end up gravitating towards different classes of theories.

Further, different scientists may start trying to explain different parts of the data than other scientists, leading their theorizing to be path-dependent. This may also change outcomes of belief in ways that are not rationally objectionable.

Even without the above two problems, theoretical ambiguities present themselves all the time in scientific and every day belief.

Given these considerations, I think that your statement above must be wrong. Certainly you can have a justified belief in one equally good explanation over another. And if that belief is true, you have knowledge (if you meet the completely inscrutable fourth condition; and nobody knows what it is.).

You seem to think that if two equally good explanations present themselves to us, the proper response is to claim suspend judgment, or at least take one judgment on board tentatively, making no knowledge claim. I'm not sure that's right. It seems like we could be justified in taking either one as justified in that case. And thus if we believe the proposition (we do), it's justified (it is), it's true (it might be), and it's X (don't ask me; ask Gettier), then you know it. Justification, to my mind, doesn't always select the one and only one best option. You seem to think it does, and so if there isn't one best explanation you don't have justification. Is that what you think?

Jannia, the poison-delivery-method is pretty complex, too. It's amazing they didn't develop a stinger, or legs, as well. They had to have a gland to produce the poison, a sac to store it, and the hypodermic needle-like teeth to inject it.

I can't imagine any of them serving a function alone.

Perhaps the rattles started appearing, and snakes started shaking them. Or perhaps they started using a shaking tail to distract predators and prey, and then those wierd mutant rattles came in handy.

We still see genetic mutations, and should one of them prove more useful, eventually, it will become dominant and more pronounced.

Reading "The Evolution Of Desire" was a huge turning point in my thought process.

Either way, it's fascinating.

P.S. I've been lost on this blog at work for the last week or two. Great work, even the commentors have more interesting thunks to think than most blog authors.

If the watchmaker analogy is false then why don't we ever find a watch without a maker? In other words, why is there no example of a machine, with many parts working together efficiently for a specific purpose, which we have witnessed being created spontaneously? This leads me to assume that each organelle in every living cell had to have an intelligent designer.

"This leads me to assume that each organelle in every living cell had to have an intelligent designer."

but each organ within an organism didn't? What's the difference?

Gotta love that watchmaker analogy. Turns out the human circadian (sleep-wake) rhythm is a little bit over 24 hours long - more like 24:11, so your body is always pushing you to go to sleep 11 minutes later every day. (Thankfully it tends to synchronize with light and darkness, so it doesn't get too far off schedule.) That's some nice watchmaking there, God.

Eliezer...

It really bothers you that a mindless, unthinking process is smarter than you, doesn't it.

I wouldn't go that far! But I do think you bias towards Faith in Flawlessness and against anything that involves randomness.

Foxes seem well-designed to catch rabbits. Rabbits seem well-designed to evade foxes... When I design a toaster oven, I don't design one part that tries to get electricity to the coils and a second part that tries to prevent electricity from getting to the coils.

Toasters are designed for simpler problems. When you need to survive overwhelming complexity/unknown unknowns/fog of war, designs relying on Feedback/Checks and Balances often survive where designs without it fail spectacularly. Examples: US founding father's design for a government; various engineering control systems; successful economic systems; protocol about feedback in science.

Human beings fake their justifications, figure out what they want using one method, and then justify it using another method.

Hmm...

When I design a toaster oven, I don't design one part that tries to get electricity to the coils and a second part that tries to prevent electricity from getting to the coils.

Er, yes you do. There is a latch to hold the contact closed, there is a thermostatic switch to dislodge the latch. It is such with many designed control mechanisms.

If you look at the ecosystem as a designed work of art rather than a designed mechanism to accomplish a purpose, rabbits and foxes competing isn't so much of a problem. Still, it's not very plausible; while there is beauty (as humans see beauty) in nature, as a whole there's not much of a consistent aesthetic.

Selfreferencing, I'm a Bayesian. I assign probabilities, not "believe". I penalize hypotheses by their unshared complexity and update based on evidence. If probabilities come out even, then I don't "suspend judgment", I judge that the probabilities are even, and plan accordingly. It's just as much a belief as anything else, and just as mandatory or prohibited based on a given body of evidence.

Celeriac: Sigh. Gating the flow of electricity and the function of the toaster, is not the same as having two parts at flow with each other. When I open the latch, the power circuits don't try to reroute electricity to the coils, or fuse the latch...

Recovering: Don't know where you're getting the "faith in flawlessness" part. Did you read the part about the retina?

Eliezer- Please update your thinking re: evolution to include the observed evolution of the tuberculosis bacteria strain w. This sort of evolution (in which organisms presented with a stressor trade and create new DNA sequences quickly- not at random at all) is going to be found to be ubiquitous. Perhaps this explains the difficulty in finding the "transitional forms" in the fossil record-- there aren't the expected transitional forms in the evolution of tuberculosis, and that is based on observation of something real- not a theory. (Another name for this phenomena is called competent cells) The purposefulness may not be so illusionary afterall. The "blind watchmaker" does not fit the evidence, and the sooner we admit that the sooner we will be able to overcome this bias. This is not just a theoretical problem-- the use of the old theory didn't give us a cure for tuberculosis, but it was a receipe for creating an incureable disease. How many times do we want to see that scenario play out?

Eliezer_Yudkowsky: Did you see the recent "What's the most important[or whatever] idea?" thing on edge.org? Richard_Dawkins's answer was Darwin's theory of natural selection, and he justified that on the grounds that the metric for a good theory is:

"what it explains, over what it needs to explain"

and then pointed out how it "explains" billions of species.

Now, he may just be using different labels for the same point you made in your post, even so, that's a remarkably confusing way of describing the appropriate way to judge a theory. That would suggest that you can't blame popular confusion on errant usenet Darwinists, that the confusion comes from the most credible biologists.

To actually explain an outcome, you must only be able to make-up-a-plausible-sounding-explanation-for that outcome, and not make-up-a-plausible-sounding-explanation-for zillions of other possible outcomes. Evolution does this, successfully, for millions of species, which is good.

The more actual outcomes a scientific theory explains, the better; the more potential outcomes it could have explained just as plausibly, the worse.

Sorry if this wasn't clear.

Eliezer said:

I'm a Bayesian. I assign probabilities, not "believe". I penalize hypotheses by their unshared complexity and update based on evidence. If probabilities come out even, then I don't "suspend judgment", I judge that the probabilities are even, and plan accordingly.

For an avowed admirer of Orwell's famous essay on English, I am surprised to see you resort to distinctions without differences. Whatever you call it (n.b. the euphemism "judge" in the last sentence quoted above), you draw a line between some claims you work with and your motor cortex acts on, and other claims you don't. That is, in plain English, you believe some claims are true and others are false.

Recovering: Don't know where you're getting the "faith in flawlessness" part.

A little from you saying you believe in flawlessness. That's an old post, but if I was a bias in your head I wouldn't hang around long at the conscious level to get squished. I'd get some strong allies and hide.

To me, you do seem to, but maybe I'm overseeing what fits my belief. If so, my apologies, I didn't mean to offend.

Did you read the part about the retina?

Yes, it's a good and valid example of how dumb and messy evolution is, but it doesn't answer my earlier comment. Sometimes some controlled imperfection is a price worth paying for not becoming a black swan's morning snack.

I aspire to perfectionism, but you can't go from there to my thinking that any given system is already perfect. Especially not evolution!

As for black swans, you need more cognitive complexity, not less, to handle them; Gaussian randomness is easy by comparison. Noise doesn't help with black swans; a random key does not fit a random lock. Evolution in particular does very poorly with black swans. All this will be one or more separate posts at some point.

Rooney, the difference is between a qualitative view and a quantitative view. If you assign a 90% probability to one belief and a 10% probability for another, you can search for a plan with a decent expected utility - a decent weighted combination of probable results given both beliefs. That really isn't the same as believing some things, and not believing others. It's a distinction with a difference.

God made the platypus to piss off Darwinists.

"Neitzche is dead. I win."

~God

But good luck figuring all this out. I'm looking forward to a rationally-derived confidence level and the exact variables to fill p{G|E} vs p {~G|~E}

Perhaps then I'll know for sure where to send my tithings.

I read a great deal about evolution as life process. I think I missed anything that addressed evolution as life origin.

This seems biased.

Eliezer, out of curiousity did you include the Azathoth references because of my earlier comments here or were you already thinking of it?

Mencius Moldbug has also used the idea of an alien's perspective on earth in order to break out of conventional wisdom. In his case it was named Beatrice. I think it was a good idea (I suggested something like it earlier) that he executed poorly.

douglas, I don't think you understand transitional fossils all that well. No Darwinist thinks there's any problem or unexpected gap in the record. Also, some quick googling and wikipediaing didn't turn up anything about a different form of evolution for tubercolosis strain w, provide some links.

DaCracka, Dawkins is not at all pissed off by the Platypus. He makes it one of his high-lighted examples in The Ancestor's Tale.

Shameless nitpick: There's nothing wrong with the logic that "radiation causes mutations, so more powerful radiation causes more powerful mutations." If you expose yourself to a thousand rads, you will get a heck of a lot of mutations. The logic breaks down when you expect these mutations to give you super powers, rather than a big mess. It sounds like you've got the superhero logic backwards: people did not look at evolutionary theory, understand it incorrectly, and then hypothesize that superheroes should be an expected outcome. They first made up the superheroes, and then looked for anything which might plausibly explain them.

Jacob Stein: Oy Vey, since you insist, here's some evolved watches: http://www.youtube.com/watch?v=mcAq9bmCeR0 (it's about ten minutes long, btw, and a bit slow at the start. But if evolved watches you must have, evolved watches you will get.)

I aspire to perfectionism, but you can't go from there to my thinking that any given system is already perfect. Especially not evolution!

I didn't think you thought evolution was perfect, quite the opposite. I thought you disliked it partly because of its random element.

As for black swans, you need more cognitive complexity, not less, to handle them

Of course, all else equal. That's like saying don't spend cash on a smoke alarm because if you're the victim of a house fire you need more money, not less.

I'm saying a little feedback might be worth the cost to perfection. It might even make that toaster of yours a bit safer.

Noise doesn't help with black swans; a random key does not fit a random lock.

I argued for "Feedback/Checks and Balances", not random noise. With clever use of these a key could indeed open many random locks.

Evolution in particular does very poorly with black swans.

Worse than a process with zero intelligence that doesn't have feedback and checks and balances?

[via link] Perfection is achieved not when there is nothing left to add, but when there is nothing left to take away.

Until you need that last little thing you burned to get the "100% efficiency" certificate.

I hope you don't think I'm having a go. I really did like most of your post :-)

Eliezer, I grasp the obvious utility of probability -- I pay for a variety of insurance policies, after all. But there are many claims (many of which you share with us on a daily basis) that you treat as having a probability of 1. About those claims, I find your assertion that you do not "believe" them to be a purely verbal distinction.

Well, in a lot of senses I treat them as having a probability of ~1. But not literally 1, because when you assign a probability of 1 to something, you can't change your mind about it, ever.

There's also the whole distinction of viewing "belief" as a primitive, rather than viewing it as a derived behavior of a system that happens to be assigning probabilities close to 1.

But then my brain doesn't actually work by Bayesian probabilities, so, yes, I believe gravity, and that if I don't eat I'll die of starvation, and many similar things whose opposites I don't bother to consider.

tggp-1) google--tuberculosis strain w evolution of 2) down the page go to the amazon book review of "Quantum Evolution" by Johnjoe Mcfadden. This will call up a page that includes the most relevent info. I realize that the info on this is not well advertised. Of course when a theory that is promoted for so long as the explanation of everything (See Dennett's "Darwin's Dangerous Idea") predicts a cure and produces an incureable disease with an ever increasing pile of dead bodies-- This is a real life example of the problem and dangers of bias.

I was nodding in agreement up until the end there. "Evolution is bodiless"? "Evolution" describes certain features of a physical process, a chemical process specifically, stretching from the beginning of life until the present day. The entire ecosystem of the Earth is, at any given moment, a time slice of this single chemical process. It isn't abstract in the least. Various sorts of selection are abstract but only in the sense that they describe aspects of this chemical process at a high level.

Douglas, you've said more than once now that evolutionary biology, when applied to tuberculosis, "predicts a cure and produces an incurable disease". Maybe I'm being dim, but this seems to me to be absolute rubbish.

1. Antibiotics did and do cure a whole lot of TB, and have saved an enormous number of lives by doing so.

2. Evolutionary biology, so far as I know, didn't have anything to do with the development of antibiotics as TB treatments nor with the way in which they were used.

3. So far as I'm aware, orthodox evolutionary biology doesn't make any predictions that contradict what's actually happened with TB antibiotic resistance.

Do you have an argument here that makes more sense than "Antibiotic-resistance in TB is bad. It has something to do with evolution. Therefore evolution is bad"?

(Oh, and while "Darwin's Dangerous Idea" is certainly very gung-ho about evolution, it does not in fact say that evolution is the explanation of everything. I have never heard anyone say that evolution is the explanation of everything.)

Great stuff, Eliezer. I'm really looking forward to you compiling your writings in a book.

g- You are being dim. (That's OK, please read on) Life forms have evolved. I can prove it. I am reasonably certain that humans have not been around since the beginning of life forms- I like humans- evolution is good. I have not questioned the fact of evolution, or if it is good or bad, I am saying that the observed instances of evolution do not fit well with the current theory as espoused by Dennett, Dawkins and Eliezer in this post. (Or any other current theory that I am aware of...) Dennett claims that "gradualism" (which is the logical premise behind the TOE that he is espousing) is "the universal solvent" In otherwords it can be used to solve any problem. Check the web address I gave TGGP- the book Quantum Evolution by Joejohn Mcfadden has the simplest and most direct explanation of the problem that TB evolution poses for both neo-darwinism and mankind. By the way, the existence of 'competent cells' has been recognized for years. To say they evolve by random mutation is to not recognize their existence. To say their existence is due to natural selection is not compatable with the data. Gradual is not how they mutate when presented with a stessor- that's where the competent comes from in the name. To suggest that this phenomena occurs in multi-cellular life forms as well as single celled organisms...that's my prediction. (I'm unaware if this has been observed yet) Wanta bet I'm right? How much?

douglas, I googled tuberculosis strain w evolution of and it didn't give me the result you were thinking of for quite a number of pages, so then I just searched amazon for "Quantum Evolution", which revealed a number of titles other than the one by Johnjoe McFadden. There still wasn't that much information there, so please give a web address (you did not in fact give me one before, I should be able to click on it or copy-paste it into the url bar of my browser). To me right now "quantum" is just serving as a magic word, I'd like a (likely simplified) explanation as to how quantum mechanics patches a hole in evolutionary theory and what that hole is in the first place.

http://en.wikipedia.org/wiki/Competent_cell

"In microbiology, genetics, cell biology and molecular biology, competence is the ability of a cell to take up extracellular ("naked") DNA from its environment."

I don't see what problem this causes for evolution.

Douglas:

1. You have not explained how anything to do with tuberculosis poses any difficulties for orthodox evolutionary biology. Gesticulating vaguely at a book that, on the face of it, looks mildly crankish is not an explanation. Repeatedly saying "Google for tuberculosis strain w" is not an explanation. I may quite possibly be being dim, but you aren't showing any sign of actual willingness to help correct my dimness.

2. When Dennett uses the term "universal acid" (not "universal solvent", IIRC) he is not claiming that evolution, or "gradualism", solves every problem. Saying things like that just increases my suspicion that you are, in the Frankfurtian sense, bullshitting.

3. If you think that the fact that some cells can take up DNA from their environment is some kind of problem for orthodox evolutionary biology, then I would like to know why. No, of course what they do is not a matter of random point mutations; so what? Sexual reproduction isn't a matter of random point mutations, either.

4. I'm not sure why you bother mentioning that you're reasonably sure that humans haven't been around since the beginning of life (reasonably sure?!). Just out of curiosity, could you give me your probability estimate for their having been around for more than, say, a week after the beginning of life?

5. You haven't stated anything definite enough to bet on, but I think it's well established that foreign DNA can get into the germ line of multicellular organisms ("endogenous retroviruses") so (a) I'm not inclined to bet against that and (b) it doesn't seem credible to claim that it's incompatible with currently-orthodox biology.

Most of the essay is thoughtful and interesting as usual - good points about laypeople uttering "evolution" with the same semantic force with which others utter "god". But why bring up that god stuff at the end? Doesn't it just create confusion to stretch metaphors this way? You have only to look at how religionists have seized on Einstein's and Hawking's metaphorical use of the word "god" to suit their purposes.

Evolution isn't "god", it's just what happens when you have competition between replicators. Trying to use "theology" and "god" and "Judeo-Christian deity" (whatever that means - I don't think Judaism calls it a "trinity", for example) when talking about evolution only makes things murky.

douglas -- it's "Johnjoe", not "Joejohn", and as a molecular biologist myself I will say I do not in the least consider it an oversight on my part never to have read his book. The idea of DNA being in quantum superposition is hard enough to swallow - then you realize that for it to work the way he wants it to (to have a differential effect on survival), the entire cell needs to be in superposition since it isn't just the DNA itself, but the mRNA that gets transcribed, and the proteins that get translated, that determine the cell's response to the environment. So every relevant molecule in the cell is in one giant superposition?? This idea is an extremely bizarre, profligate wasteful hunch, but worse, it fills no conceptual gaps. Whether there are any out-of-the-ordinary phenomena going on in bacterial adaptation is itself controversial and not agreed on. If there is ever any consensus that there is a phenomenon that needs explanation, may some scientists have the humility to test something more mundane before trotting out the word "quantum" along with the idea that we have to rethink almost everything.

Eliezer- Your point about Darwin having found God --just not the one anybody was hoping for-- is brilliant. The problems evolution poses for religion are obvious, but thats the first time I've seen it framed that way. Great post.

Though one nitpick I would offer: (which might be helpful if you're planning on referencing this post in the future?) Saying your sister shares half your genes is a bit off. If your sister shares only half your genes that would make her something closer to an earth worm or perhaps a house plant (I forget exactly how the commonality of genes among organisms breaks down). I think if you clarify it with 'your sister shares half the genes that differentiate you genetically from the human race', this might be more correct. Or perhaps its that half her DNA is sequenced exactly like yours? Point is, if you're endeavoring to clear up some of the misconceptions about evolution, you might want to be a little more exacting with how you talk about genes.

Pete- I agree that I am usually skeptical about things with the word quantum in the title. Seems a lot of BS fits into that bag. Yes it is Johnjoe, I like his writing because it is clear. He tells me that his next book will be on Occum's Razor, by the way. Probably excellent. Pete, g, TGGP-- I am an independent researcher and it is becoming obvious to me that the methods I have developed are not ordinary. This doesn't really surprise me since the one thing that people who know me well can agree on is that "You're not like other people." (Sometimes they mean that as a compliment- I hope...) Here is a web address that can be of value pnas.org/cgi/content/full/96/6/2591 The original discussion about TB in particular comes from Hall-- Molecular Microbiology 33 pages 982-993. (I'm not sure how available that is to you.) The notion that competent cells do not fit well with the "random mutation + natrual selection" model of evolution is not new or particularly controversial with those who know of the phenomena. How to deal with the phenomena is up in the air-- This is the area of science where new discoveries and new theories are made-- the stuff I like. Also these are the areas where personal bias is most likely to be engaged and needed to be overcome-- thus my interest in this particular site.

Douglas, what's the relevance of the fact that you're an independent research and consider your methods not-ordinary to what Pete, TGGP, and I have said to you?

You are extraordinarily reluctant to be specific about either your evidence or your conclusions from that evidence. You say that you want Eliezer to "update [his] thinking re: evolution", but any time you're asked specific questions about what sort of position you think preferable you clam up and offer only vague references to other people's work.

So far, you've offered a pointer to one source that says that horizontal gene transfer has been important in bacterial evolution.and maybe in evolution of other organisms. OK, fine; what's supposed to be the problem here? What reason do you have to think that Eliezer's thinking about evolution ignores horizontal gene transfer?

And you've given a 12-page section of a book that supposedly gives "the original discussion about TB". Well, that's nice, but since you refuse to tell us what about TB constitutes what evidence in favour of what ideas about evolution and why, it's not much use. Especially to those of us who happen not to have the book. (Your track record does not encourage me to go to much trouble or expense to find it.)

It appears from some things that you've said that you actually want to promote some view radically at odds with the current scientific consensus, featuring the belief that "life can only come from life", some sort of central irreducible causative role for consciousness, etc. Well, all these things could be true. But if you are trying to get people to believe them rationally, you need to offer some actual evidence comparable to the amount of evidence that has led most scientists to think that such ideas aren't helpful. You don't seem to be interested in doing that; rather, you keep asserting without evidence that the consensus view is a matter of "bias".

This is not helpful.

(And I'd still be interested to know your estimate of the probability that human life postdated other life on earth by less than a week.)

(Oops: "an independent researcher", of course, not "an independent research". I don't think it's likely that you're someone's pet AI project :-).)

g- What I'm trying to say about evolution is not outside the scientific consensus. That is that the way these bacteria evolve is not well explained by the neo-darwin model of evolution. I've supplied at least one link that should make that clear. (pnas.org/cgi/content/full/96/6/2591, for example) I'm sorry that my links/ hints to find this simple fact have not been more helpful. My comments about my methods are a means of begging some indulgence-- if I google 'competent cells' or 'tuberculosis strain w' I'll find something that makes my point in a few minutes-- I am realizing this is not universally true. (I have a bias that people will do what I do-- I can get over that and be more specific in the future) You are correct that the original work is long-- that's why I gave the link to amazon and the johnjoe book-- for me it opens to the page that has the relavent information. Apparently others had trouble... I am not offering a new theory that explains this form of evolution-- rather I am pointing out that it is not time to conclude that "we know about how things have evolved" especially when the current model has known- well known- shortcomings. Consider that the only actual evolution that has been observed does not fit the model and you can understand this is not a small issue. Is this inappropriate for this venue? My estimate of the probability that human life post dated other life on Earth is 99.9999999(you can add as many 9's as you like)%.

Douglas, you already know what your main point is, and you already believe it, whatever it is, so you have two advantages over us in looking at a random Google hit and turning it into perceived evidential support for your points. The reason why others haven't been impressed by your saying "google tuberculosis strain w" isn't that we're too lazy to type that into Google (though, speaking only for myself, once you've clearly already done that and found what seems to you a good page, it seems odd that you're so reluctant to say what it actually is).

When you want to point to a particular piece of information on the web, there's a thing called a URL you can use. It's both less effort and more useful than giving a vague description of how to find something using Google.

What do you think "the current model" is? Are you saying it doesn't include horizontal gene transfer? (I;m not a biologist, but I'd thought such things were common knowledge among evolutionary biologists.) A great deal of evolution has been observed and fits the current model very well. What on earth are you on about when you say "the only actual evolution that has been observed does not fit this model"?

The question about human life on earth versus other life on earth was "postdated by more than a week". There is a reason for that.

As for appropriateness in this venue, that would be a question for the people who run it. I suppose alleged biases involving evolution are fair game in comments to a post about evolution here. If you ever actually said what those alleged biases are and why they constitute biases rather than mere disagreements, though, it would be less unhelpful.

g- Oh, the probability that the appearance of human life postdating the appearance of other life by more the a week is 99.9999999...% (I understand the question now) I am not reluctant to say where I get information. I am more than happy to. I appologize for not making it easier-- The information on tuberculosis can be found in Molecular Microbiology 33 pages 982-993. The best summary of the information can be found in "Quantum Evolution" by Johnjoe McFadden. You can read the relevant pages at http://books.google.com/books?id=eQbZE0oWqMwC&pg=PA272&lpg=PA272&dq=tuberculosis+strain+w+evolution+quantum&source=web&ots=xRaNWVf0IU&sig=C6OGOz2ZK0tgP7Wx17p4f0L_Tu8 Another article that explains the difficulty of this type of evolution can be found at pnas.org/cgi/content/full/96/6/2591 The difficulties of this type of mutation can be read about in Scientific American April 2006 pages 81-83. There are 3 other referenced works of interest listed in the article. (More if you need them) Biases of interest-- a current scientific theory that does not explain all phenomena should be recognized as incorrect or incomplete. Newton's law of gravity never correctly predicted the orbit of Mercury-- otherwise it seemed very good. Einstein's theory does predicit of the orbit of Mercury and more-- But as good as Newton's theory was, Einstein's turned the world upside down. As close to correct that classical physics was-- QM turned the world inside out. To say a theory is good doesn't mean that the more correct theory won't change things radically. What would a Bayesian think the odds the new theory would be radically different be? So the bias in this case is "If it's close it must be mostly right." Is this phenomena one that will be the down-fall of the current theory? I don't know-- I'm guessing the non-randomness of these mutations will lead to a new understanding of life and evolution and that the new theory will be radically different from the existing one. I maybe wrong, but I don't want a bias to get in the way of the investigation. (I'm sorry, I realize that this is an issue that the "creationists" have jumped on and the fact that I am interested in it too probably kicks up all kinds of bias (the question about the apperance of humans...) and I should be more careful in making my statements.)

Allow me to clarify douglas a bit if I can. Correct me if I'm wrong.

What douglas is (I think) invoking here is a phenomenon called the evolution of evolvability. Essentially the idea is that evolution is not quite as blind or random as pure classical Darwinism would have it, but that it evolves. Evolution evolves, recursively. Lineages that do a better job exploring fitness landscape space do a better job surviving, and so therefore their genes tend to do a better job surviving as well. Evolution therefore favors the emergence of genetic systems that aid evolution.

Competent cells are an example of this. Competence (the ability to take up naked DNA) is likely an evolvability adaptation. Having it turned on in all cells would be disasterous since the entire population would be virus fodder. But having genes in there that cause this phenomenon to happen and having them activate occasionally is good for all genes involved since under stress it greatly increases the likelihood of major discontinuities that might propel the lineage out of a valley in fitness landscape space.

If you want a really far out and extreme take on this, read this:

http://users.tpg.com.au/users/jes999/gencog.htm

Stewart crosses over into evolutionary romanticism on occasion, so I don't buy everything he says. But he does have a grasp of just how big an idea the evolution of evolvability is. I admire visionaries with the courage to write like this, even if some of what they write strays a little into la-la-land. That the price you pay for getting excited about the new. We have far too few of such people these days.

Evolutionary theory with the evolution of evolvability is to classical Darwinism what Einsteinian and Quantum mechanics are to classical Newtonian physics. All the responders are right in that this stuff is a part of modern evolutionary theory, but it's not really a part of "Darwinism." Darwin didn't predict this. Calling modern evolutionary theory "Darwinism" is like calling physics "Newtonism." Darwin was Newton, but evolutionary theory did not end with him.

Now for an annoying Google suggestion: go to scholar.google.com or arXiv and search for "evolution of evolvability" as a phrase.

http://scholar.google.com/scholar?as_q=&num=10&btnG=Search+Scholar&as_epq=evolution+of+evolvability&as_oq=&as_eq=&as_occt=any&as_sauthors=&as_publication=&as_ylo=&as_yhi=&as_allsubj=all&hl=en&lr=

“It would be H. P. Lovecraft's Azathoth, the blind idiot God burbling chaotically at the center of everything, surrounded by the thin monotonous piping of flutes.”

Certainly you have read Dawkins’ “The blind watchmaker”. If somebody else has pointed this out already, sorry, I haven’t read all contributions.

Is yours a form of new (old) mystical philosophy utilizing evolution and ‘alien’ gods? Kind of ambiguous text. Everything IS. As we are these curious, never satisfied living entities, we want to know, why. Good for us. It seems that the ones with their monotheistic cultural backgrounds want more, they want to recreate or redesign or even reinvent life. A form of perverted anthropomorphism. First we create a god in our image who supposedly has created us in his, and then we imitate this invented god by creating new lives that will possibly supercede us humans. A form of controlled evolution? Competition with an imaginary god? On top of this, ID is a delusion that allows the curious and religiously motivated ones, to accept evolution, somehow. Eliezer, are you somehow a proponent of a strand of ID?

Douglas, your ideas are reasonable but unproven.

It certainly makes sense that new proteins with new functions should arise by recombination among old proteins with old functions. Start with functional groups that do things -- hold a calcium ion, hold a magnesium ion, fit to a lactam group, etc -- and fit them together in just the geometry that gets a result, and then fiddle with the details to change that geometry slightly. Sure, that makes sense.

And to get brand new protein structures you need to evolve them special -- to get selected starting with a protein that has a different structure you need to go through intermediate stages that are likely to have no function at all. But if the protein is under selection that won't happen, and if there's no selection it's sill quite unlikely.

So it's plausible there should be some mechanism to do all that.

However, the trouble here is that this mechanism would have to be mostly inactive. Do we create novel new proteins every generation? Every hundred generations? Not as far as I know. What maintains this mechanism that produces a good result in one individual per thousand generations (maybe), and produces no result or bad results the rest of the time? It would have to be a side effect of something else, something that does get used a lot. And that may be possible, but would you expect it to be the same mechanism in prokaryotes and eucaryotes? We haven't observed it yet in that case. So two different mechanisms, like they have vastly different ways to have sex.... And we still haven't particularly found those mechanisms.

I don't regard your tuberculosis story as useful. OK, lots of things are preadapted toward making certain discoveries. But not other discoveries.

Sure, it isn't random. But the assumption of randomness was a mathematical convenience. Mutation shouldn't be random, There's been 3 billion years of selection to encourage mutation at the times and places it does the most good -- to the extent that organisms can predict that.

There's a lot about the way populations respond to natural selection that isn't known yet, there are exciting discoveries waiting for us. You and I both have hints about what those discoveries will look like. But the discoveries haven't been made yet and we're only guessing about them at this point. I can guess pretty well about some genetic mechanisms that would increase the rate of evolution, but I can't guarantee that nature hasn't found even better mechanisms that outcompete the ones I imagine.

It really kills me to see an article as narrow-sighted as this on an otherwise good blog. For every intelligent observation in this article, Elizer assumes "rational" airs as misguided and irrational as a fundamentalist's preception of science.

What the hell is he typing about when he ponders the "purpose" of evolution from the perspective of a "God" trying to accomplish something in terms of making a single species successful? I hope anyone reading this can see the multiple ways this is a limited and backwards way to think about this "issue", but if not consider if "God's purpose" was to make a good simulation.

Then when he asserts that "Religionists are waiting for science to discover God" and that "Science has already discovered God" the whole article looks like a retarded athiest argument rather than an article on overcoming bias.

I'm not defending "Religionists", but I am attacking shoddy ridiculous thought presented as objective logic.

"Intelligent Design, the clever Trojan Horse designed expressly as a method to get creationism past the constitutional principal of the separation of church and state, focuses very narrowly on the alleged ‘intelligence’ the theist sees in nature. They target rather benign examples which they believe are designed by the unnamed creator (though a single question will divulge its identity) such as the human eye or the bacterial flagellum. Very wisely, they completely avoid implicating design in pathogenic organisms in public discourse, or even amongst themselves, as it would shine a light on an aspect of their designer the usual theist doesn’t like. There are exceptions to this, of course, ‘fire and brimstone’ Christians come to mind, but this book is not aimed at them. They already believe in an evil god, though I know for a fact that they would contest this!

Malevolent Design, simply put, is the secondary negative quality that one should see if one first sees intelligence. If there be a master designer then one should be able to gauge how it feels about its creations by the interaction between them. Their various body parts should spell out its intentions. What we see in nature becomes a moral issue. It goes far beyond this, though. There are four more very large categories that I will discuss, at length, in the proceeding sections: environmental, cosmological, mythological and finally, chronological."

I agree with everything you said except this, "It's not a god, but it's more closely akin to a god than it is to snow on a television screen."

Snow in a tv screen is not random, but in fact a fractal image made up of multiple intruding signals, the strongest ones having the most to do with the seemingly random image. So that seems a lot like evolution to me.

Fell free to correct me if I'm wrong, just throwing out my two cents.

The evolutionary process is poorly characterised as being blind or idiotic:

Human beings are the product of choices by intelligent agents, capable of predicting the consquences of their actions, and are not - in any reasonable sense - solely the product of "blind" selective forces.

"It really bothers you that a mindless, unthinking process is smarter than you, doesn't it." Up: Caledonian

Taken into effect that the "blind watchmaker" has been working on every organism on earth for billions of years, the complexity and diversity of the same environment, it is no surprise that humans would want to take the quick and easy path. The outcome will probably be disastrous which is kind of amusing.

good essay. i especially like the bit about Azathoth.

Ia Ia,

Venger As'Nas Satanis
Cult of Cthulhu High Priest

So basically you're saying that evolution follows the idea of "a million chimps in a room will eventually write Shakespeare"? That its a matter of the number of times a new structure appears in each generation, rather than the quality of the structure itself? I agree with the idea of randomness being the source of creation. Being an artist there often seems to be no correlation with my ideas and the act of actually thinking them into being, they just sort of aggregate into a whole concept. In fact more often then not a bad idea usually occurs when i force myself to design it. Maybe theres a similar process going on with evolution, there is no purpose to the events that occur but chaos can gain an apparent rhythm that gives rise to function.

You say that the struggle between a rabbit and a fox is conflicting, but it is not, this struggle is the point of evolution it is not random or even organized it is beyond that I cannot explain it, my point however is that what seems cruel and ugly is really species helping one another become better. Look at most predators they do not go for the strongest of the prey the go for the weak and easy targets, humans see this as cruel when in fact it is helping to further that species, with the weak and sick killed off future generations will not be hindered by weak genes or genes that have become negative do to environmental changes. The best way to put it is evolution unlike humanity learns from mistakes made in the past and improves upon the weak areas, evolution is an artist who is working on his masterpiece trying to find every last little thing and make it perfect.

Sorry, but I disagree. There is an evolution fairy. There are billions of them. What guides the course of evolution among more developed species are the species themselves, aka evolution fairies or the intelligence inherent in all living things. I like to call it survival of the sexiest.

A snake with rattles is more likely to survive and prosper than one without it and this makes him "sexier" to the other females. They consciously decide that they want some of that (although they may not know exactly what That is) and flock to him. This is what keeps the rattle-construction genes afloat.

You'd think this would be uncontroversial, but I often have great difficulty explaining what it means for evolution to not have a purpose. "But if it's just random, then how does it work?"

"The main point is that the gene's effect must cause copies of that gene to become more frequent in the next generation. " Pah! I disagree. The gene's effect must not cause copies of that gene to become less frequent in the next generation is the very best you can hope for. More accurate still is that in conflict and cooperation with other genes in the organism the genes effect must not afford less of a chance of being given a free ride.

Isn't the vast majority of DNA just genes that don't do any harm? Evolution is not the thrusting, carving, shaping force depicted so often, it is (as usual) the work of a small (say 20% (a guess)) of genes and the rest just don't compete so get a free ride.

why do these evolution polemics always attack the straw man of some imagined universally agreed-upon "Judeo-Christian" personal creator god that must be benevolent and rational? there is by no means a consensus on this among the christians and jews i've met, never mind muslims, hindus, buddhists, daoists, pagans... has anyone ever provided persuasive evidence for the explanatory power of Hinduism? yes. they're called hindus. etc.

call me a creationist but to my mind you come off just as foolish (and worse, inhumane) as your straw-man "Goddist" (such derogatory language has no place in science writing) when you deride an entire belief system (that is in fact only a figment of your own skewed, purportedly "objective" belief system) with such a logically fallacious deconstruction of the religious mindset.

i hope you are aware that there are many people who believe in a god or gods and also fully believe in the mechanical operations of evolution. these people have no need to explain the question of intelligent vs random design, which is unprovable and therefore irrelevant. there is more paradox, wisdom, and rationality in religion than you give it credit for, and an open-minded monotheist does a lot more to advance the debate than a childishly polemical 'evolutionist'.

interesting that you note: "if you can invent an equally persuasive explanation for any outcome, you have zero knowledge." try as you might, persuasion will never be the exclusive domain of the rational scientist, and there will never be a time when everyone is persuaded by one explanation. so will we never have any knowledge, or must we admit to multiple knowledges? i'm rambling now.

-josh feola leantimes2gmail dotcom

did you seriously delete my comment? weird.

I'm not sure you can assume that Odin isn't around. He was relatively hands off in the legends, so no evidence for him is not proof that he doesn't exist. It could be a fitting end to a life struggling against blindly cruel Nature where upon death, you go to Valhalla if you die in battle; otherwise you go to hell.

one has to keep in mind that evolution has no goal. it is inherently neither positive nor negative. it simply occurs, for better or worse, until death do us part

The human retina is constructed backward: The light-sensitive cells are at the back, and the nerves emerge from the front and go back through the retina into the brain. Hence the blind spot. To a human engineer, this looks simply stupid - and other organisms have independently evolved retinas the right way around. Why not redesign the retina?

Some of the biggest jaw dropping comments I hear have to do with taking something that is an obvious flaw and bending over backwards to come up with a reason that it isn't flawed. Instead of saying that old elephants starving is cruel and a flaw* they say that there is a deeper purpose or design that can explain away the cruelty.

Instead of calling out a nasty thing for being a nasty thing they try to claim that our understanding is flawed. and the nasty really isn't all that nasty. This is fuzzy enough on topics like retinas and dying elephants to trick people who don't know much about retinas or dying elephants. But what happens if I point at something like Cerebral Palsy and say, "Explain that!"

The typical next step is to add an intelligent Super Nasty that ruined the perfectly nice world. If we keep pushing Explain we delve into huge swaths of arguments about good, evil, gods, and devils but are still left with hospital wards packed full of children inflicted with Cerebral Palsy. At some point, most people push Ignore. And then their child is born with Cerebral Palsy. It is kind of hard to ignore that. When they complain that something nasty happened, someone nearby tells them that there is a deeper purpose or design.

I can understand why people aren't big fans of this.

And... reading back over my comment I forgot to make the point I going to make and made a different one in its stead. Ah well.

If people find the rabbit and fox analogy not close to home, they should look at modern evidence on psychopathy. If true, it seems to indicate that significant (2-3 %) part of human population has absolutely no compassion for others. This trait also appears genetic. We are rabbits, they - foxes.

A gene that sacrifices one unit of resources to bestow three units of resource on a brother, may promote some copies of itself by sacrificing one of its constructed organisms.

Haha, genes follow UDT!

This post is awesome in so many ways. Needs more up-votes.

As an actually related point, you mention that if evolution could explain toaster ovens as well as trees, it would be worthless. And I've read enough of your work to understand why that is.

Well... I worry we may already be there. On one site I've seen someone respond to a typical creationist nonsense - that the mouse trap is irreducibly complex and until scientists show it isn't, the ID points stands - by linking to a step-by-step visualization of a mousetrap evolving from some wire - of course with the (so false it should not have been assumed even hypothetically) assumption that it has successive generations and selection based on catching mice. It actually seemed to work.

And I first thought of it, "that's pointless, but cute". And then the next moment: "Hold on! That's not evidence for evolution! If anything, it actually weakens our case!". This made me suspect that, given enough motivation, we could show almost anything to have a plausible evolutionary route. We need to be very careful of this sort of thing, because if there happens to be anything that had actual intelligent intervention in its evolution, we'd be very hard pressed to notice. In hindsight, it would seem obvious: Of course that particular step couldn't evolutionarily happen! Of course our theories were getting weird trying to explain it!

We must keep evolution falsifiable, or we stand the risk of one day being subject to a fairly rude awakening.

To me the biggest problem with Judaism, Christianity, and Islam is that they do not seem to provide one clear answer as to why God created the universe in the first place. Given this, I have no way of changing probabilities when the world seems cruel or contradicting, since they do not claim the world as perfect. This of course doesn't depend on what my prior is.

For evolution, I find a weakness (I am not an expert on the subject) that related to being able to explain all outcomes equally. If an animal feature seems in perfection with survival, this is due to evolution, if a feature isn't, this is a proof of no God, hence evolution. Shouldn't an imperfect human featuring a blind spot eventually get extinct? Not necessarily. What if it was extinct? Then it's evolution.

I find explaining by evolution is not disprovable, at least of the (seemingly infinite) millions and millions of years.

Your brother or sister shares half your genes.

This is rarely true, you share 50% of your genes with your mother an father each, but you can theoretically share anything from 0%-100% (Probably normal distribution curve), since your mother/father has 46 (23 pairs) chromosomes and you receive a single random chromosome from each pair (total 23 singles), that are then paired with 23 singles from your father/mother.

Note that I have not taken Chromosomal crossover into account.

I disagree with just about everything you said. We cannot just be evolved just randomly there has to be a creator. you should go to this link: http://www.clarifyingchristianity.com/creation.shtml

The human retina is constructed backward: The light-sensitive cells are at the back, and the nerves emerge from the front and go back through the retina into the brain. Hence the blind spot. To a human engineer, this looks simply stupid—and other organisms have independently evolved retinas the right way around.

This isn't entirely accurate - there are advantages to having the retina at the back, because the nerve improves visual precision. I don't recall exactly how this works, but I read about it in Life Ascending by Nick Lane if anyone wants to verify it.

Well wrote, many quotes from mindful people from past history.. I still feel a strong rhetorical question here... Why? I think the question will remain unanswered for many years to come. But I agree with what you say, I rather be in spirit of knowledge, then ignorance in bliss :). As far as a deity goes, my family and I still believe with diminishing returns. All I know is life is a trip. I ask the author is this, are you children on bored with this idea??

John Carey

When I design a toaster oven, I don't design one part that tries to get electricity to the coils and a second part that tries to prevent electricity from getting to the coils. It would be a waste of effort. Who designed the ecosystem, with its predators and prey, viruses and bacteria? Even the cactus plant, which you might think well-designed to provide water fruit to desert animals, is covered with inconvenient spines.

I understand your point and your examples, but it is wrong to infer that conflicting subsystems are evidence of poor design or no design at all. For instance, in CMOS design of logical ports, we use PMOS(es) to pull-up and NMOS(es) to pull-down the output voltage(s). More generally, when we want to design something able to change its state in a certain state-space, we often put sub-systems which go one against the other and let the contour conditions decide where the balance will be (in the CMOS example, the contour conditions are the input(s) of the logical gate). We as human designers do this a lot, actually.

I agree with all you other points, though.

TLDR: We describe evolution as the collective pressures that cause creation of new species, similar to gravity and water carving out various canyons. It is incorrect to react to canyons in the following way: "Canyons are they way they are for no reason?! ha! I know that they are the way they are because the goddess Erosia likes them in that shape."

So basically the bottom line I'm getting from this a kind of variant of Occam's Razor: Evolution is unlikely to produce solutions that include complexity or considerations it doesn't need.

Or more specifically, and with an example, there are probably a lot more ways to get to taste buds that give good results in environments and contexts the organism is likely to encounter than ways to get to taste buds that give good results in both environments and contexts that the organism is likely and unlikely to encounter.

When someone tells me, 'Nature is cruel and controversial - look how foxes devour hares', I think that the problem is not the particular case of X eating Y, but that everyone eats something. Where is any controversy, if it is in fact the rule?

Also, while I agree with your general idea, you are too gentle in execution. The idea that 'Nature' is really, horribly accidental doesn't come through clearly. You say only the genes matter, and it is just another reduction of the case. People will suspect that if something alive lives in some medium, than the medium must have a say in its evolution (and they might think themselves part of the medium). Try including a story where a volcanic eruption wipes out a patch of unsuspecting lichen. Drama, pointlessness, no anthropization. See if they can muster a similar degree of righteous fury:))

This essay is wonderful. It is the first coherent and plausible defense of polytheism I've ever read. It is a much more intellectually satisfying version of creationism than monotheism.

And all just as an aside too, off the cuff. Kudos Mr. Yudkowsky. It really is a pleasure to read your work.

I really enjoyed this article. Well written as always.

These watch- and machine-analogies floating around are quite amusing. I remembered this video I watched when I was 15. It gives some good examples of why toasters and watches don´t evolve by themselves in our environment.

https://www.youtube.com/watch?v=mcAq9bmCeR0

If evolutionary biology could explain a toaster oven, not just a tree, it would be worthless.

But it can, if you consider a toaster to be an embodied meme. Of course, the evolution that applies to toasters is more Lamarckian than Darwinian, but it's still evolution. Toaster designs that have higher utility to human beings lead to higher rates of reproduction, indirectly by human beings. The basic elements of evolution, namely mutation and reproduction, are all there.

What's interesting is that while natural evolution of biological organisms easily gets stuck in local optima, the backwards retina being an example, artificial evolution of technology often does not, due to the human mind being in the reproductive loop. This is, in part, because we can perform local hill-climbing in the design space after a large potential improvement is introduced, much as described in this article on the use of hill climbing in genetic algorithms. For example, we can imagine making the change to the retina to fix its orientation, and then, holding that change in place, search for improvements in the surrounding design space to make it workable, thereby skipping over poorly designed eyes and going straight to a new and better area in the fitness landscape.

There was an early Christian named Marcion who said that the creator god was a cruel nutcase who shouldn't be worshipped.

Today, there's a subculture of Christianity that believes in "process theology", that the universe is not governed by a god of love, but we are part of the process of making it that way.

Calling evolution uninteligent is foolish egocentrism. This is a process that has produces a world of nanotech-based creatures of astronomical complexity, using the entire surface of the Earth as a giant quantum computer. The simplest element of biological creation--the behavior of a single protein--requires computation at or beyond the limit of humanity's computing capability. It's staggering to me that all the structured computation and creative outpouring of evolution gets called "uninteligent" despite producing creatures of complexity vastly beyond the capability of the human mind to comprehend. It is a mind, and an (super) intelligent one by virtue of this ability to create complex structures through astronomical volumes of structured computation, but it is not an intelligence like ours.

It is our concept of intelligence that is deficient in not accommodating other minds so different from our own. Indeed, evolution isn't going to score high on any IQ test (except by way of human beings which it has created), because we designed measures of intelligence as ways of measuring ourselves. Not calling evolution a mind requires the egocentric stance that a mind must work like ours or it is not a mind.

Indeed, a human being would have designed a better retina since we have different faculties than evolution. But if the tables were turned, we could be labeled unintligent non-minds for not being able intuitively imagine protein folding or the various other computational faculties that evolution has and we do not.

To strongman a counter to the fox-rabbit-toaster argument: when you make a toaster, you do make a part to prevent electricity from getting to the coils. In fact, you make several of them. First, you make a timer to shut the toaster off when it's done. You also make a fuse, an some over-heating shut-off switch. These prevent a run-away situation that would cause the toaster to burn down your house. So an advocate of a god who makes both rabbits and foxes could point out that foxes and rabbits make a self-regulating population control system, and that would follow the same sort of engineering logic as putting a fuse on a toaster.

When I design a toaster oven, I don't design one part that tries to get electricity to the coils and a second part that tries to prevent electricity from getting to the coils. It would be a waste of effort. Who designed the ecosystem, with its predators and prey, viruses and bacteria? Even the cactus plant, which you might think well-designed to provide water fruit to desert animals, is covered with inconvenient spines.

Well, to be fair, if I want to design an image classifier, I might very well make one part that tries hard to categorize photos and another part that tries hard to miscategorize them.

"Anyone who really believed in a vague deity, would have recognized their strange inhuman creator when Darwin said "Aha!" - too strong a statement. Inability to recognize something you believe in is not improbable. Suppose I believe Harry Potter mages infiltrate Earth and suppose they really do. If I see a guy waving their wand should I actually believe it's a real Harry Potter mage not someone who pretends to be? No, since even if Harry Potter mages are real it is much more likely to see a Muggle pretender than a real breaker of the Statute of Secrecy. For similar reasons they may wait for "cause beyond the cause" - judging (wrongly) that evolution does not suffice.

When I design a toaster oven, I don't design one part that tries to get electricity to the coils and a second part that tries to prevent electricity from getting to the coils.

On the other hand, there was a fleeting time (after this post) when generative adversarial networks were the king of some domains. And more fairly as counterpoints go, the body is subject to a single selective pressure (as opposed to the pressures for two rival species), and yet our brains and immune systems are riddled with systems whose whole purpose is to selectively suppress each other.

Of course there are features of the ecosystem that don't match any plausible goal of a humanized creator, but the analogy is on wobblier ground than Eliezer seems to have thought.

This provides an argument in favor to theological atheism as well: the belief that God exists, but he does not want us to believe in him. God created evidence to prove that the universe, earth, and life came into existence and developed slowly by natural processes, without any apparent divine intervention. He left this evidence everywhere for us to discover — in the rocks, in fossils, in the DNA of all living things, and in outer space. Since God chose to hide his divine creative powers by using only natural processes that make him redundant, we can conclude he wants to remain invisible and not be acknowledged or worshipped. What do you think about it?

“Whatever happens, happens because of the genes themselves.”

I agree, but isn't there much more to it than that?

In other words, the behavior of genes themselves will dominate, until and unless a meteor crashes into the planet, thereby introducing massive evolutionary chaos and entropy due to a cocktail of forces that destroy some species while placing immense evolutionary pressure on all. This would be accompanied by immense radiation that acts as both an accelerant and randomizer that injects both leapfrogging and gaps in otherwise linear genetic evolution.

I believe your model accommodates this, but it doesn't seem to highlight it.

If true, the outcome of such “catastrophic destructive radioactive events” could be far more profound and genetically-defining than the eons of more calm and consistent mostly-linear genetic evolution itself.

The behavior and response of genes is always defining, of course, but when acted upon by immense outside entropic force, that force itself seems to be more defining the behavior of the genes.

The role of “catastrophic cosmic radioactive events” (large meteors) gets me halfway to explaining things like saw sharks and hammerhead sharks (which otherwise seem designed). But if multiple catastrophic events occurred, as evidence suggests, then evolutionary outcomes would indeed be so disparate that they might have the appearance of having been designed, while in reality, they were just repeatedly and substantially disrupted and catalyzed over millennia to force into existence the miraculous variants we see all around us today.

I have long wondered why (it seems) that absolutely no one has postulated significant theories around the role of repeated disruption over the pace and degree of mutation caused by mostly cosmic-induced catastrophic/radioactive events on this planet over the millennia.

Even so, it seems like the multiple Indian Gods theory is one worth holding onto as a back up as efficiently explains it all.